Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931866.1_cds_XP_016478514.1_70147
CDS Infomation

[gene=LOC107799901] [db_xref=GeneID:107799901] [protein=asparagine--tRNA ligase, cytoplasmic 1-like] [protein_id=XP_016478514.1] [location=complement(join(40580..40763,40959..41017,41855..41984,42069..42322,42727..43368,44149..44628))] [gbkey=CDS]
Sequence

ATGTCATTTGATTCAACGCCGCCGGCGGTGGAGAAGCTCACCCTAAACGCCGCCACCGTA
GACGAAGCCAAATTCTCCCAACGCGTCCCGATCCGTTCAATCGTCGGCCGTCCCGACGGC
GGAGCTGGACTCGCCGGAAATGTGGTCAAAATCGGCGGCTGGGTAAAAACAGGCCGAGAA
CAAGGCAAAGGTTCATTCGCGTTCCTTGAAGTGAACGACGGCTCTTGCCCGGCGAATCTC
CAAGTAATCGTCGATGCTTCAGTTCACAAGCTCGGTGATTTGGTACTTACTGGTACTTGC
GTACACGTGGAAGGTGAATTGAAGGTACCTCCTGAAGGCGCGAAGCAAAAAGTTGAACTT
CGTGTCCAGAAGGTTTTATCTGTCGGTACTGTTGATGCTGCCAAGTATCCATTGCCGAAA
ACTAAGTTAACGCTTGAGTTTTTAAGGGATTTTGTTCATCTTCGCCCCCGAACTAACACG
ATTTCTGCCATTGCAAGAATCCGTAATGCCTTAGCTTATGCCACCCATACATTCTTCCAG
AAGAATGGGTTTCTTTATATCCACACTCCAATCGTCACAACAAGTGATTGTGAGGGTGCT
GGTGAGATGTTCCAAGTTACTACTTTGATAAACGAAGCTGAAAAATTGGAGAAGGAGCTG
AAAGAGAATCCTGCTCCTTCAGAATTTGAGATTAAAGCTGCTGAGCAACTTGTCAAAGGG
AAAGGTGAGGCAGTTGCTCAGTTAAAAGCTAATAAGGCAAGCATTGAGAAAAGTGGTGGC
AGTATTGTGGACATCAACAAGCAAATCAGTGCTGCAGTTGCTGAGCTGCAAAGAGCTAAA
GAGAATCTACTGAAGTTGCAAGAGAGATTTAAACTGGGAGAAAGGTGTAGACTCTCTGCT
GGTATTCCCAAAAAGGATGGAAAGGTTGATTACTCTGAGGATTTCTTTGCACGGCAAGCT
TTCTTGACTGTGTCTGGCCAACTCCAAGTTGAAACCTATGCCTGTGCGCTTTCTAGTGTG
TATACTTTTGGACCAACTTTTCGAGCCGAACAGTCCCACACTTCTCGGCATCTTGCGGAG
TTCTGGATGGTGGAGCCTGAAATAGCTTTTGCAGATCTCCAGGATGATATGAATTGTGCT
GAGGCATATGTGAAGTTTCTGTGTCAGTGGTTACTTGACCATTGCCTTGATGACATGGAA
TTTATAACTAAATTTATAGATAAAGATGCTCTGAGTAGACTTAGAATGGTTGCCTCATCA
AACTGTTACCGAATAACTTATACAGAAGCCATAGCCATTCTCGAGGTAGCAGCCAAAGTG
AAGAAATTTGAAAATAAAGTAGAATGGGGTATTGACTTAGCATCTGAACATGAAAGATAT
TTGACCGAAGAGCATTTTAAGGCACCTGTTATTGTGTTCAACTACCCAAAAGGGATTAAA
GCATTTTACATGAAGGTGAATGCAGACAAGAAGACAGTTGCTGCCATGGATCTGCTTGTT
CCTAAGGTGGGAGAACTAATTGGAGGAAGCCAAAGAGAAGAGGATTATGAGGTCCTCAGA
ACAAGGATACTGGAGATGGGTTTACCACTAGAGCCATATGAGTGGTATCTAGACCTGAGG
CGCTATGGTACAGTGAAACACAGTGGTTTCGGTTTAGGCTTTGAGCGAATGATTCTTTTC
GCCACTGGGATAGAAAACATTCGAGATGTCATTCCCTTCCCCAGATATCCAGGAAGAGCG
GATCTCTAA

Peptide Sequence

PEP ID

XP_016478514.1
PEP Infomation

PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Nicotiana tabacum]
Sequence

MSFDSTPPAVEKLTLNAATVDEAKFSQRVPIRSIVGRPDGGAGLAGNVVKIGGWVKTGRE
QGKGSFAFLEVNDGSCPANLQVIVDASVHKLGDLVLTGTCVHVEGELKVPPEGAKQKVEL
RVQKVLSVGTVDAAKYPLPKTKLTLEFLRDFVHLRPRTNTISAIARIRNALAYATHTFFQ
KNGFLYIHTPIVTTSDCEGAGEMFQVTTLINEAEKLEKELKENPAPSEFEIKAAEQLVKG
KGEAVAQLKANKASIEKSGGSIVDINKQISAAVAELQRAKENLLKLQERFKLGERCRLSA
GIPKKDGKVDYSEDFFARQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTSRHLAE
FWMVEPEIAFADLQDDMNCAEAYVKFLCQWLLDHCLDDMEFITKFIDKDALSRLRMVASS
NCYRITYTEAIAILEVAAKVKKFENKVEWGIDLASEHERYLTEEHFKAPVIVFNYPKGIK
AFYMKVNADKKTVAAMDLLVPKVGELIGGSQREEDYEVLRTRILEMGLPLEPYEWYLDLR
RYGTVKHSGFGLGFERMILFATGIENIRDVIPFPRYPGRADL

Transcript Sequence

Gene sequence data has not been registered.